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Hacking COVID-19: Tracing SARS-CoV-2's Evolution

Explore viral evolution through bioinformatics analysis of SARS-CoV-2. Learn phylogenetic tree analysis and investigate COVID-19 origins hypothesis.

Explore viral evolution through bioinformatics analysis of SARS-CoV-2. Learn phylogenetic tree analysis and investigate COVID-19 origins hypothesis.

This course cannot be purchased separately - to access the complete learning experience, graded assignments, and earn certificates, you'll need to enroll in the full Applied Bioinformatics Specialization program. You can audit this specific course for free to explore the content, which includes access to course materials and lectures. This allows you to learn at your own pace without any financial commitment.

Instructors:

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Hacking COVID-19: Tracing SARS-CoV-2's Evolution

This course includes

4 Hours

Of Self-paced video lessons

Beginner Level

Completion Certificate

awarded on course completion

Free course

What you'll learn

  • Learn phylogenetic tree analysis and dating techniques

  • Investigate viral evolution patterns using bioinformatics tools

  • Analyze multiple sequence alignments of viral genomes

  • Explore COVID-19 origin hypotheses through data analysis

Skills you'll gain

Phylogenetic Analysis
Viral Evolution
Bioinformatics
COVID-19 Origins
Multiple Sequence Alignment
Tree Dating
SARS-CoV-2
Computational Biology
HIV Analysis

This course includes:

0.33 Hours PreRecorded video

2 app items

Access on Mobile, Tablet, Desktop

FullTime access

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There are 2 modules in this course

This course explores the evolution of SARS-CoV-2 through advanced bioinformatics methods. Students learn to analyze phylogenetic trees, perform multiple sequence alignment, and investigate viral origins. The curriculum covers both theoretical concepts and practical applications, including a case study on HIV transmission and investigation of the "Italy First" hypothesis for COVID-19 origins. The course combines fundamental genomic concepts with hands-on practice in evolutionary analysis.

Chapter 7: Studying Viral Evolution

Module 1 · 2 Hours to complete

Chapter 8: Investigating COVID-19 Origins

Module 2 · 2 Hours to complete

Fee Structure

Instructors

Niema Moshiri
Niema Moshiri

4.8 rating

26 Reviews

4,945 Students

5 Courses

Bioinformatics Researcher and Computer Science Educator

Niema Moshiri has transitioned from a Ph.D. student to an Associate Teaching Professor in the Department of Computer Science and Engineering at the University of California, San Diego. His academic journey began with a B.S. in Bioengineering: Bioinformatics, followed by a Ph.D. in Bioinformatics and Systems Biology from UCSD, where he was co-advised by Siavash Mirarab and Pavel Pevzner. His research focuses on computational biology, particularly in phylogenetics and phylogenomics, as well as computational viral epidemiology. As an educator, Moshiri has made significant contributions to computer science education, including co-authoring the interactive online textbook "Data Structures: An Active Learning Approach" and developing Massive Adaptive Interactive Texts (MAITs) for use in flipped classrooms and MOOCs. He is affiliated with the Department of Biomedical Informatics at the UC San Diego School of Medicine and the Halicioglu Data Science Institute. Moshiri's work extends to reviewing for numerous scientific journals and conferences in bioinformatics and computer science education.

Pavel Pevzner
Pavel Pevzner

8,33,777 Students

16 Courses

Pioneering Bioinformatics Scholar and Computational Biology Innovator

Pavel Arkadevich Pevzner serves as the Ronald R. Taylor Professor of Computer Science at the University of California, San Diego, and director of the NIH Center for Computational Mass Spectrometry, where he has revolutionized the field of computational biology since 2000. After receiving his Ph.D. in mathematics and physics from the Moscow Institute of Physics and Technology, he completed postdoctoral work with Michael Waterman at USC, before establishing himself through positions at Penn State and USC. His groundbreaking research spans bioinformatics algorithms, genome rearrangements, DNA sequencing, and computational proteomics, leading to significant advances in genome assembly and antibiotics discovery. His academic excellence has been recognized through numerous prestigious honors, including the Howard Hughes Medical Institute Professorship (2006), ACM Fellowship (2010), ISCB Fellowship (2012), and the ACM Paris Kanellakis Theory and Practice Award (2018). As an educator, he has transformed bioinformatics education through innovative approaches, including the development of massive open online courses that have reached over half a million students, and authored influential textbooks including "Computational Molecular Biology: An Algorithmic Approach" and "Bioinformatics Algorithms: An Active Learning Approach"

Hacking COVID-19: Tracing SARS-CoV-2's Evolution

This course includes

4 Hours

Of Self-paced video lessons

Beginner Level

Completion Certificate

awarded on course completion

Free course

Testimonials

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Frequently asked questions

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