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Genome Assembly Programming Challenge
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Genome Assembly Programming Challenge

This course is part of Core Concepts in Data Structures and Algorithms.

Course Cost

Free course

Advanced

Skill Level

16 Hours

Self-paced lessons

This course cannot be purchased separately - to access the complete learning experience, graded assignments, and earn certificates, you'll need to enroll in the full Data Structures and Algorithms Specialization program. You can audit this specific course for free to explore the content, which includes access to course materials and lectures. This allows you to learn at your own pace without any financial commitment.

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4.5

44,271 Enrolled

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English

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olive-leaves-logo

4.5

44,271 Enrolled

olive-leaves-logo

English

What you'll learn

  • Implement genome assembly algorithms using overlap graphs

  • Develop solutions using de Bruijn graphs for DNA sequence analysis

  • Handle real sequencing data and its technological challenges

  • Assemble bacterial genomes from millions of DNA fragments

  • Apply graph theory to solve biological sequence problems

  • Create efficient programs for large-scale genomic data analysis

Skills you'll gain

Genome Assembly
Bioinformatics
De Bruijn Graphs
DNA Sequencing
Algorithm Design
Graph Theory
Data Structures
Computational Biology
Programming
Sequence Analysis

This course includes:

0.8 Hours PreRecorded video

3 programming assignments

Access on Mobile, Tablet, Desktop

FullTime access

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Certificate
Certificate

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Share your certificate with prospective employers and your professional network on LinkedIn.

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Top companies offer this course to their employees

Top companies provide this course to enhance their employees' skills, ensuring they excel in handling complex projects and drive organizational success.

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There are 3 modules in this course

This advanced course teaches genome assembly algorithms through a real-world case study of the 2011 European E. coli outbreak. Students learn to develop programs for assembling genomes from DNA sequencing data, progressing from simple viral genomes to complex bacterial ones. The curriculum covers crucial concepts including overlap graphs, de Bruijn graphs, and practical challenges in modern sequencing technologies. Through hands-on programming assignments, students implement algorithms to assemble various genomes, culminating in the analysis of the E. coli X strain.

The 2011 European E. coli Outbreak

Module 1 · 4 Hours to complete

Assembling Genomes Using de Bruijn Graphs

Module 2 · 4 Hours to complete

Genome Assembly Faces Real Sequencing Data

Module 3 · 8 Hours to complete

Fee Structure

Individual course purchase is not available - to enroll in this course with a certificate, you need to purchase the complete Professional Certificate Course. For enrollment and detailed fee structure, visit the following: Core Concepts in Data Structures and Algorithms

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Faculties

These are the expert instructors who will be teaching you throughout the course. With a wealth of knowledge and real-world experience, they're here to guide, inspire, and support you every step of the way. Get to know the people who will help you reach your learning goals and make the most of your journey.

Genome Assembly Programming Challenge

Advanced

Skill Level

16 Hours

Self-paced lessons

Course Cost

Free course

Completion

CERTIFICATE

Frequently asked Questions

Below are some of the most commonly asked questions about this course. We aim to provide clear and concise answers to help you better understand the course content, structure, and any other relevant information. If you have any additional questions or if your question is not listed here, please don't hesitate to reach out to our support team for further assistance.